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PGx Star Allele Coverage

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Theoretical Coverage

The PGx genes and star/variant alleles listed below can be detected by DRAGEN Array v1.1 if available on the microarray. Known and novel star alleles not in the below list will not be reported. Star allele definitions are sourced from PharmVar and PharmGKB.

Among the PGx genes, HLA-A, HLA-B, and IFNL3/IFNL4 alleles are covered through tagging variants, specifically HLA-A,*31:01 (rs1061235.A>T); HLA-B,*15:02 (rs144012689.T>A); HLA-B,*57:01 (rs2395029.T>G); HLA-B,*58:01 (rs9263726.G>A); IFNL3/4, rs12979860 variant (T). Reliability of the tagging SNPs varies depending on the population. Additional information on PGx gene types, variant type versus star allele type, can be found here: Introducing-dragen-array-1-0-for-infinium-array-based-pharmacogenomics-analysisarrow-up-right

Gene
PGx Alleles

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PGx Star Allele Coverage for Specific PGx Products

PGx star alleles can only be called when the related variants in the star allele definition are present in a PGx product. An auxiliary file ([Product]_GS_import.txt) is provided for each product with the PGx variants and associated star alleles. The product files pages that contain the auxiliary files are listed in the table below.

Instructions on how to use the auxiliary file can be found here: .

Product
GS Import File Name
Product Files Link

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Known Limitations of GDA-ePGx, GSAv4-ePGx, and GCRA-ePGx.

  • APOE: GSAv4-ePGx and GCRA-ePGx do not support calling E2 and E4 due to the lack of functional probes for rs7412 and rs429358.

  • CYP2A6: GDA-ePGx does not support *5 due to lack of coverage for *5 core variants.

  • CYP4F2: for all three products

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PGx Variants Masked in DRAGEN Array

During DRAGEN Array star allele calling, poorly performing PGx variants are masked and treated as "No Calls". Star alleles that are solely defined by the masked variants will NOT be called by DRAGEN Array. The tables below provide the variants that are masked per product with each row represents a single variant. The Variant_ID matches the ID field of the corresponding SNV VCF entry of the PGx product.

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GDA-ePGx

Manifest
Gene_Symbol
Variant_ID

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GSAv4-ePGx

Manifest
Gene_Symbol
Variant_ID

hashtag
GCRA-ePGx

Manifest
Gene_Symbol
Variant_ID

CACNA1C

Reference;rs1006737.G>A;rs1034936.C>A;rs1034936.C>G;rs1034936.C>T;rs1051375.G>A;rs1051375.G>C;rs10774053.A>C;rs10774053.A>G;rs10848635.T>A;rs10848635.T>C;rs11062040.C>T;rs12813888.A>C;rs12813888.A>T;rs2041135.T>C;rs215976.C>G;rs215976.C>T;rs215994.T>C;rs216008.C>T;rs216013.A>G;rs2238032.T>C;rs2238032.T>G;rs2238087.C>G;rs2238087.C>T;rs2239050.G>A;rs2239050.G>C;rs2239128.T>A;rs2239128.T>C;rs2283271.T>A;rs723672.C>A;rs723672.C>G;rs723672.C>T;rs7295250.T>C;rs7316246.G>A;rs7316246.G>C;rs758723.T>A;rs758723.T>C

CACNA1S

Reference;rs1800559.C>A;rs1800559.C>T;rs772226819.G>A

CFTR

Reference;rs113993958.G>A;rs113993958.G>C;rs113993958.G>T;rs115545701.C>T;rs11971167.G>A;rs11971167.G>T;rs121908752.T>G;rs121908753.G>A;rs121908755.G>A;rs121908755.G>T;rs121908757.A>C;rs121909005.T>C;rs121909005.T>G;rs121909013.G>A;rs121909020.G>A;rs121909020.G>C;rs121909041.T>C;rs141033578.C>T;rs150212784.T>C;rs150212784.T>G;rs186045772.T>A;rs193922525.G>A;rs193922525.G>C;rs200321110.G>A;rs202179988.C>T;rs267606723.G>A;rs267606723.G>T;rs368505753.C>T;rs397508256.G>A;rs397508288.A>C;rs397508288.A>G;rs397508387.G>T;rs397508442.C>T;rs397508513.A>C;rs397508537.C>A;rs397508759.G>A;rs397508759.G>T;rs397508761.A>G;rs74503330.G>A;rs74551128.C>A;rs74551128.C>T;rs75039782.C>G;rs75039782.C>T;rs75527207.G>A;rs75541969.G>C;rs76151804.A>G;rs77834169.C>A;rs77834169.C>G;rs77834169.C>T;rs77932196.G>A;rs77932196.G>C;rs77932196.G>T;rs78655421.G>A;rs78655421.G>C;rs78655421.G>T;rs78769542.G>A;rs80224560.G>A;rs80282562.G>A

COMT

Reference;rs13306278.C>T;rs165599.G>A;rs165599.G>C;rs165722.C>T;rs165728.C>A;rs165728.C>G;rs165728.C>T;rs165774.G>A;rs174675.T>C;rs174696.C>A;rs174696.C>T;rs174699.C>T;rs2020917.C>T;rs2075507.G>A;rs2075507.G>C;rs2075507.G>T;rs2239393.A>G;rs4633.C>T;rs4646312.T>C;rs4646316.C>G;rs4646316.C>T;rs4680.G>A;rs4818.C>G;rs4818.C>T;rs5746849.A>G;rs5993882.T>C;rs5993882.T>G;rs5993883.T>G;rs6267.G>A;rs6267.G>T;rs6269.A>G;rs6269.A>T;rs7287550.T>C;rs7287550.T>G;rs737865.A>G;rs737866.T>A;rs737866.T>C;rs740603.A>G;rs9332377.C>A;rs9332377.C>T;rs933271.T>A;rs933271.T>C;rs9606186.C>A;rs9606186.C>G;rs9606186.C>T

CYP1A2

*10;*11;*12;*13;*14;*15;*16;*17;*18;*19;*1A;*1B;*1C;*1D;*1E;*1F;*1G;*1J;*1K;*1L;*1M;*1N;*1P;*1Q;*1R;*1S;*1T;*1U;*1V;*2;*20;*21;*3;*4;*5;*6;*7;*8;*9

CYP2A6

*1;*10;*11;*12;*13;*14;*15;*16;*17;*18;*19;*1x2;*2;*20;*21;*22;*23;*24;*25;*26;*27;*28;*31;*34;*35;*36;*37;*38;*39;*4;*40;*41;*42;*43;*44;*45;*46;*48;*49;*5;*50;*51;*52;*53;*54;*55;*56;*6;*7;*8;*9

CYP2B6

*1;*10;*11;*12;*13;*14;*15;*17;*18;*19;*2;*20;*21;*22;*23;*24;*25;*26;*27;*28;*3;*31;*32;*33;*34;*35;*36;*37;*38;*39;*4;*40;*41;*42;*43;*44;*45;*46;*47;*48;*49;*5;*6;*7;*8;*9

CYP2C19

*1;*10;*11;*12;*13;*14;*15;*16;*17;*18;*19;*2;*22;*23;*24;*25;*26;*28;*29;*3;*30;*31;*32;*33;*34;*35;*38;*39;*4;*5;*6;*7;*8;*9

CYP2C8

*1;*10;*11;*12;*13;*14;*15;*16;*17;*18;*2;*3;*4;*5;*6;*7;*8;*9

CYP2C9

*1;*10;*11;*12;*13;*14;*15;*16;*17;*18;*19;*2;*20;*21;*22;*23;*24;*25;*26;*27;*28;*29;*3;*30;*31;*32;*33;*34;*35;*36;*37;*38;*39;*4;*40;*41;*42;*43;*44;*45;*46;*47;*48;*49;*5;*50;*51;*52;*53;*54;*55;*56;*57;*58;*59;*6;*60;*61;*62;*63;*64;*65;*66;*67;*68;*69;*7;*70;*71;*72;*73;*74;*75;*76;*77;*78;*79;*8;*80;*81;*82;*83;*84;*85;*9

CYP2D6

*1;*1-*90;*10;*100;*101;*102;*103;*104;*105;*106;*107;*108;*109;*10x2;*11;*110;*111;*112;*113;*114;*115;*116;*117;*118;*119;*12;*120;*121;*122;*123;*124;*125;*126;*127;*128;*129;*13;*13-*1;*13-*2;*13-*4-*68;*130;*131;*132;*133;*134;*135;*136;*137;*138;*139;*13x2-*1;*13x2-*2;*14;*140;*141;*142;*143;*144;*145;*146;*147;*148;*149;*15;*150;*151;*152;*153;*154;*155;*156;*157;*158;*159;*160;*161;*162;*163;*164;*165;*166;*167;*168;*169;*17;*170;*171;*172;*17x2;*18;*19;*1x2;*2;*20;*21;*22;*23;*24;*25;*26;*27;*28;*29;*29x2;*2x2;*3;*30;*31;*32;*33;*34;*35;*35x2;*36;*36;*36-*10;*36-*10x2;*36x2-*10;*36x3-*10;*37;*38;*39;*4;*40;*41;*42;*43;*43x2;*44;*45;*46;*47;*48;*49;*4M;*4N-*4;*4x2;*5;*50;*51;*52;*53;*54;*55;*56;*58;*59;*6;*60;*62;*64;*65;*68;*68-*4;*69;*7;*70;*71;*72;*73;*74;*75;*8;*81;*82;*83;*84;*85;*86;*87;*88;*89;*9;*90;*91;*92;*93;*94;*95;*96;*97;*98;*99;*9x2

CYP2E1

*1A;*1B;*2;*3;*4;*5A;*5B;*6;*7A;*7B;*7C

CYP3A4

*1;*10;*11;*12;*13;*14;*15;*16;*17;*18;*19;*2;*20;*21;*22;*23;*24;*26;*28;*29;*3;*30;*31;*32;*33;*34;*35;*37;*38;*39;*4;*40;*41;*42;*43;*44;*45;*46;*47;*48;*5;*6;*7;*8;*9

CYP3A5

*1;*3;*6;*7;*8;*9

CYP4F2

*1;*10;*11;*12;*13;*14;*15;*17;*2;*3;*4;*5;*6;*7;*8;*9

DPYD

Reference;rs111858276.T>C;rs112766203.1.G>A;rs112766203.2.G>C;rs114096998.1.G>T;rs114096998.2.G>A;rs114096998.2.G>C;rs115232898.T>C;rs116364703.T>A;rs1180771326.T>C;rs137878450.C>A;rs137999090.C>T;rs138391898.C>T;rs138545885.C>A;rs138616379.C>T;rs139459586.A>C;rs139834141.C>T;rs140039091.C>G;rs140114515.C>T;rs140602333.G>A;rs140602333.G>T;rs140989814.C>G;rs141044036.T>C;rs141439344.C>T;rs141462178.T>C;rs141726921.C>T;rs142512579.C>T;rs142619737.C>G;rs142619737.C>T;rs143154602.G>A;rs143154602.G>T;rs143815742.1.C>A;rs143815742.2.C>T;rs143879757.1.G>T;rs143879757.2.G>A;rs143986398.G>C;rs144395748.1.G>C;rs144395748.2.G>T;rs144935781.T>C;rs145112791.G>A;rs145529148.T>C;rs145548112.C>A;rs145548112.C>T;rs145773863.C>T;rs146356975.T>C;rs146529561.G>A;rs147545709.G>A;rs147601618.A>G;rs148799944.C>G;rs148994843.C>T;rs150036960.G>C;rs150385342.1.C>T;rs150385342.2.C>A;rs150437414.A>G;rs151074666.C>T;rs17376848.A>G;rs1801158.C>T;rs1801159.T>C;rs1801160.C>T;rs1801265.A>G;rs1801266.G>A;rs1801267.C>T;rs1801268.C>A;rs183105782.A>G;rs183385770.C>T;rs186169810.A>C;rs187713395.A>G;rs188052243.T>C;rs190577302.G>C;rs190951787.G>C;rs190951787.G>T;rs199549923.G>T;rs199634007.G>T;rs199646142.C>T;rs199777072.C>T;rs200064537.A>T;rs200296941.T>C;rs200562975.T>C;rs200643089.A>C;rs200687447.1.C>T;rs200687447.2.C>A;rs200687447.2.C>G;rs200693895.A>G;rs200709381.T>G;rs201018345.C>T;rs201035051.T>G;rs201268750.G>T;rs201433243.C>T;rs201615754.1.C>A;rs201615754.2.C>T;rs201648613.C>G;rs201785202.G>A;rs202144771.G>A;rs202212118.C>A;rs2297595.T>C;rs267598785.G>A;rs267598786.C>T;rs267598789.G>A;rs367619008.T>C;rs368146607.T>G;rs368152149.T>C;rs368327291.C>G;rs368519011.T>C;rs368970772.G>T;rs369103276.A>G;rs369575517.G>A;rs370569731.1.C>G;rs370569731.2.C>T;rs370615432.C>A;rs370707404.A>G;rs371258350.C>T;rs371313778.C>T;rs371587702.1.G>A;rs371587702.2.G>C;rs371792178.1.G>A;rs371792178.2.G>C;rs372058915.T>C;rs372307932.A>T;rs372909322.T>C;rs374527058.A>G;rs374531732.C>T;rs374825099.1.G>T;rs374825099.2.G>C;rs374827081.G>C;rs375436137.C>T;rs375990187.A>G;rs376073289.1.C>T;rs376073289.2.C>A;rs376128878.G>T;rs376273539.G>C;rs377143350.C>T;rs377169736.C>G;rs3918289.G>A;rs3918289.G>C;rs3918290.C>G;rs3918290.C>T;rs45589337.T>C;rs527580106.T>C;rs528152707.C>A;rs528430685.G>A;rs528768620.C>T;rs529019871.T>C;rs532341730.A>T;rs536577604.T>C;rs538336580.T>A;rs538703919.G>A;rs547099198.G>A;rs548783838.C>T;rs55674432.C>A;rs556933127.A>C;rs557220418.G>A;rs558354142.G>A;rs55886062.1.A>C;rs55886062.2.A>T;rs559427764.C>A;rs55971861.T>G;rs56005131.G>T;rs56038477.C>T;rs568169006.T>C;rs568367673.C>A;rs569661196.A>G;rs570122671.G>A;rs571114616.A>G;rs573299212.C>T;rs575763449.G>A;rs575853463.C>T;rs576409484.T>A;rs57918000.G>A;rs59086055.G>A;rs60139309.T>C;rs60511679.A>C;rs61622928.C>T;rs61757362.G>A;rs6670886.C>A;rs6670886.C>T;rs672601273.1.C>A;rs672601273.2.C>T;rs672601275.T>G;rs672601276.C>A;rs672601282.G>A;rs672601284.C>T;rs672601285.T>C;rs672601287.T>G;rs672601288.C>A;rs67376798.T>A;rs72547601.T>C;rs72547602.T>A;rs72549303.del;rs72549304.G>A;rs72549304.G>C;rs72549304.G>T;rs72549305.T>C;rs72549306.1.C>A;rs72549306.2.C>T;rs72549307.T>C;rs72549308.T>G;rs72549309.ATGA[1];rs72549310.G>A;rs72975710.1.G>A;rs72975710.2.G>C;rs745512069.G>A;rs745704371.G>C;rs745833535.T>C;rs745911874.C>T;rs745982505.1.T>C;rs745982505.2.T>A;rs746115989.C>T;rs746329786.T>A;rs746777181.C>T;rs747132274.C>G;rs747161261.C>T;rs747627716.A>C;rs747633945.C>T;rs747858350.G>A;rs747872037.C>A;rs748214188.A>T;rs748235192.1.T>A;rs748235192.2.T>C;rs748266854.G>A;rs748320430.A>C;rs748620513.C>A;rs748620513.C>G;rs748639205.A>C;rs748639205.A>G;rs748853941.T>C;rs748958293.G>A;rs748974194.G>A;rs749157068.C>A;rs749269410.C>T;rs749354734.A>T;rs749586100.T>A;rs749699298.A>C;rs749982106.G>A;rs750147471.T>C;rs75017182.G>C;rs750224169.G>A;rs750423752.A>C;rs750687600.C>T;rs750721736.A>T;rs751049055.C>A;rs751104498.T>C;rs751113340.G>A;rs751190912.G>A;rs751340819.A>G;rs751374989.T>A;rs751399062.G>T;rs751841116.1.C>A;rs751841116.2.C>T;rs751848058.T>A;rs752020412.C>T;rs752228747.G>A;rs752388408.C>T;rs752518145.C>A;rs752985272.C>A;rs753166888.C>G;rs753217888.G>C;rs753296078.C>G;rs753419296.C>G;rs753527420.C>G;rs753707032.G>A;rs753710779.G>A;rs753820482.T>C;rs753950237.G>A;rs754028972.A>G;rs754125729.1.G>A;rs754125729.2.G>T;rs754467630.G>A;rs754786483.T>C;rs755155824.C>A;rs755407188.T>G;rs755416212.C>T;rs755428442.C>G;rs755645831.A>C;rs755692084.T>G;rs755729055.T>C;rs756020314.G>C;rs756372042.A>G;rs756613407.T>C;rs756684474.T>C;rs756890859.T>C;rs756992995.C>T;rs757155354.T>C;rs757227327.C>T;rs757342874.C>T;rs757376267.C>A;rs757695236.C>T;rs757954074.C>T;rs757958938.T>C;rs757994597.G>A;rs758154803.A>G;rs758489611.C>T;rs758514990.C>T;rs758649719.C>T;rs758699471.T>C;rs759082282.C>A;rs759249769.G>T;rs759424419.A>T;rs759479759.T>C;rs759562628.T>G;rs759766897.T>C;rs759967863.A>G;rs760038956.C>T;rs760222167.T>C;rs760235888.C>T;rs760485592.G>A;rs760553268.G>C;rs760570391.A>G;rs760663364.G>A;rs760663364.G>C;rs761302217.T>C;rs761351410.G>A;rs761479700.G>C;rs761555670.T>C;rs761609256.T>G;rs762083671.T>A;rs762102298.A>C;rs762198241.G>A;rs762430779.G>T;rs762446803.A>C;rs762468894.G>C;rs762523739.T>A;rs762533012.C>T;rs762598766.T>C;rs762779297.T>C;rs762858106.C>T;rs762911226.T>A;rs763008163.T>G;rs763061658.A>G;rs763449831.C>T;rs763506271.T>C;rs763557204.A>G;rs763572567.T>G;rs763623595.A>C;rs763784786.G>C;rs763862486.C>T;rs763893877.T>C;rs763984510.G>C;rs764111543.C>T;rs764270260.G>A;rs764555085.A>G;rs764635955.G>T;rs764666241.C>A;rs764679468.A>C;rs764945792.C>T;rs765001324.C>T;rs765034707.C>A;rs765075551.T>C;rs765131182.G>A;rs765247038.G>A;rs765309287.G>T;rs765465250.T>C;rs765640386.C>A;rs765990958.G>A;rs766411970.A>C;rs766438205.T>C;rs766635900.C>T;rs766700777.C>G;rs766761199.T>G;rs766833304.G>C;rs766885021.A>C;rs767200577.T>C;rs767376585.C>G;rs767437717.G>T;rs767464878.C>A;rs767468952.C>T;rs767482279.A>G;rs767547827.G>C;rs767818267.C>T;rs767836989.T>C;rs767986711.T>G;rs768117152.T>C;rs768157853.G>C;rs768200107.T>G;rs768288280.T>C;rs768501828.T>C;rs768507975.A>T;rs768680499.G>T;rs768915005.C>T;rs769190350.T>A;rs769306962.C>T;rs769466648.1.T>G;rs769466648.2.T>C;rs769514867.G>T;rs769696395.T>C;rs769709846.T>C;rs769820114.C>T;rs769847078.T>C;rs769932607.G>A;rs770229152.T>A;rs770566506.A>G;rs770958862.G>A;rs771194906.A>G;rs771534236.T>C;rs771536388.C>T;rs771573678.T>A;rs771646887.C>T;rs771648776.T>C;rs771885007.A>G;rs771930534.1.A>T;rs771930534.2.A>G;rs772097379.G>A;rs772264512.G>A;rs772320654.T>C;rs772358811.C>G;rs772544099.G>T;rs772826416.A>G;rs772906420.C>T;rs773159364.C>G;rs773407491.T>C;rs773584401.C>A;rs773652644.T>C;rs773815814.1.C>A;rs773815814.2.C>T;rs773868825.C>T;rs773983635.A>T;rs774134971.T>C;rs774500505.A>T;rs774579695.1.C>T;rs774799003.G>A;rs774883578.A>C;rs775494607.G>A;rs775526810.C>A;rs775570841.G>C;rs775601164.G>A;rs775926386.G>C;rs776082092.C>T;rs776236081.C>T;rs776289153.C>T;rs776321529.G>C;rs776662759.T>G;rs776973423.C>T;rs776984091.T>C;rs777220476.1.C>T;rs777220476.2.C>A;rs777238016.T>C;rs777347164.C>T;rs777368221.A>C;rs777425216.C>A;rs777425216.C>T;rs777560627.G>A;rs777673186.G>C;rs777902288.T>A;rs778022685.C>T;rs778054451.C>T;rs778141885.T>C;rs778298325.C>T;rs778601245.C>T;rs778754188.A>G;rs778760295.C>G;rs778776264.T>C;rs778867644.T>C;rs778911905.A>C;rs779465366.A>G;rs779557503.G>A;rs779573574.T>A;rs779728902.A>T;rs779925747.T>G;rs779967271.T>C;rs780025995.G>A;rs780047918.T>C;rs780120302.T>C;rs78060119.C>A;rs780813130.C>T;rs780873985.T>C;rs780885126.T>C;rs781184141.T>C;rs80081766.C>T;rs866110709.C>T;rs866869468.C>A;rs867143119.C>A;rs867226255.C>T;rs867232786.C>T;rs867600987.C>T;rs868047175.C>T;rs868235016.C>T

DRD2

Reference;rs1076560.C>A;rs1076560.C>G;rs1076563.A>C;rs1079596.C>A;rs1079596.C>T;rs1079597.C>T;rs1079598.A>G;rs1079598.A>T;rs1110976.T>G;rs11214607.T>G;rs1124491.G>A;rs1124491.G>C;rs1124493.T>G;rs1125394.T>C;rs12364283.A>G;rs12574471.C>G;rs12574471.C>T;rs17601612.G>C;rs1799732._113475530insG;rs1799732.dup;rs1799978.T>C;rs1800497.G>A;rs1800498.G>A;rs1801028.G>C;rs2075652.G>A;rs2234689.G>C;rs2283265.C>A;rs2440390.T>C;rs2514218.C>T;rs2587548.G>A;rs2587548.G>C;rs2734833.G>A;rs2734841.A>C;rs2734841.A>G;rs2734841.A>T;rs2734842.G>C;rs4274224.G>A;rs4274224.G>C;rs4436578.C>G;rs4436578.C>T;rs4460839.C>G;rs4460839.C>T;rs4648317.G>A;rs4648318.T>A;rs4648318.T>C;rs4648318.T>G;rs4936274.A>G;rs4936274.A>T;rs6275.A>G;rs6277.G>A;rs6279.G>C;rs7122246.G>A;rs7131056.A>C;rs7131056.A>G;rs7131440.C>T

F13A1

Reference;rs5985.C>A;rs5985.C>T

F2

Reference;rs1799963.G>A;rs3136516.G>A;rs5896.C>G;rs5896.C>T

F5

Reference;rs6025.C>T

FKBP5

Reference;rs1360780.T>A;rs1360780.T>C;rs17614642.T>C;rs3800373.C>A;rs3800373.C>G;rs4713916.A>C;rs4713916.A>G;rs4713916.A>T;rs73748206.C>T;rs9380524.C>A;rs9380524.C>T

G6PD

202G>A_376A>G_1264C>G;A;A- 202A_376G;A- 680T_376G;A- 968C_376G;Aachen;Abeno;Acrokorinthos;Alhambra;Amazonia;Amiens;Amsterdam;Anadia;Ananindeua;Andalus;Arakawa;Asahi;Asahikawa;Aures;Aveiro;B (reference);Bajo Maumere;Bangkok;Bangkok Noi;Bao Loc;Bari;Belem;Beverly Hills, Genova, Iwate, Niigata, Yamaguchi;Brighton;Buenos Aires;Cairo;Calvo Mackenna;Campinas;Canton, Taiwan-Hakka, Gifu-like, Agrigento-like;Cassano;Chatham;Chikugo;Chinese-1;Chinese-5;Cincinnati;Cleveland Corum;Clinic;Coimbra Shunde;Cosenza;Costanzo;Covao do Lobo;Crispim;Dagua;Durham;Farroupilha;Figuera da Foz;Flores;Fukaya;Fushan;Gaohe;Georgia;Gidra;Gond;Guadalajara;Guangzhou;Haikou;Hammersmith;Harilaou;Harima;Hartford;Hechi;Hermoupolis;Honiara;Ierapetra;Ilesha;Insuli;Iowa, Walter Reed, Springfield;Iwatsuki;Japan, Shinagawa;Kaiping, Anant, Dhon, Sapporo-like, Wosera;Kalyan-Kerala, Jamnaga, Rohini;Kambos;Kamiube, Keelung;Kamogawa;Kawasaki;Kozukata;Krakow;La Jolla;Lages;Lagosanto;Laibin;Lille;Liuzhou;Loma Linda;Ludhiana;Lynwood;Madrid;Mahidol;Malaga;Manhattan;Mediterranean Haplotype;Mediterranean, Dallas, Panama, Sassari, Cagliari, Birmingham;Metaponto;Mexico City;Miaoli;Minnesota, Marion, Gastonia, LeJeune;Mira d'Aire;Mizushima;Montalbano;Montpellier;Mt Sinai;Munich;Murcia Oristano;Musashino;Namouru;Nankang;Nanning;Naone;Nara;Nashville, Anaheim, Portici;Neapolis;Nice;Nilgiri;No name;North Dallas;Olomouc;Omiya;Orissa;Osaka;Palestrina;Papua;Partenope;Pawnee;Pedoplis-Ckaro;Piotrkow;Plymouth;Praha;Puerto Limon;Quing Yan;Radlowo;Rehevot;Rignano;Riley;Riverside;Roubaix;S. Antioco;Salerno Pyrgos;Santa Maria;Santiago;Santiago de Cuba, Morioka;Sao Borja;Seattle, Lodi, Modena, Ferrara II, Athens-like;Seoul;Serres;Shenzen;Shinshu;Sibari;Sierra Leone;Sinnai;Songklanagarind;Split;Stonybrook;Sugao;Sumare;Sunderland;Surabaya;Suwalki;Swansea;Taipei, Chinese-3;Telti, Kobe;Tenri;Tokyo, Fukushima;Toledo;Tomah;Tondela;Torun;Tsukui;Ube Konan;Union,Maewo, Chinese-2, Kalo;Urayasu;Utrecht;Valladolid;Vancouver;Vanua Lava;Viangchan, Jammu;Villeurbanne;Volendam;Wayne;West Virginia;Wexham;Wisconsin;Yunan

GRIK1

Reference;rs2832407.C>A;rs2832407.C>T

GRIK4

Reference;rs12800734.G>A;rs1954787.T>C

GRIN2B

Reference;rs1019385.C>A;rs1072388.G>A;rs1072388.G>C;rs1806191.G>A;rs1806191.G>T;rs1806201.G>A;rs2058878.T>A;rs2058878.T>C;rs2160733.A>C;rs2160734.C>G;rs2160734.C>T;rs2284411.C>T;rs890.A>C;rs890.A>G

HLA-A

*31:01;Reference

HLA-B

*15:02;*57:01;*58:01;Reference

HMGCR

Reference;rs10474433.T>C;rs10474433.T>G;rs12654264.A>T;rs17238540.T>G;rs17244841.A>T;rs17671591.C>T;rs3846662.A>G;rs3846662.A>T

HTR2A

Reference;rs17288723.T>C;rs17289304.T>C;rs17289304.T>G;rs1928040.G>A;rs1928040.G>C;rs2274639.C>G;rs2274639.C>T;rs2770296.C>G;rs2770296.C>T;rs3742278.A>G;rs3803189.T>G;rs6305.G>A;rs6311.C>A;rs6311.C>T;rs6312.C>A;rs6312.C>G;rs6312.C>T;rs6313.G>A;rs6313.G>C;rs6314.G>A;rs659734.G>A;rs659734.G>C;rs659734.G>T;rs7997012.A>C;rs7997012.A>G;rs7997012.A>T;rs9316233.C>A;rs9316233.C>G;rs9316233.C>T;rs9567746.A>C;rs9567746.A>G

HTR2C

Reference;rs1023574.C>G;rs1023574.C>T;rs12836771.A>G;rs1414334.C>G;rs2497538.A>C;rs3813928.G>A;rs3813929.C>G;rs3813929.C>T;rs498207.G>A;rs518147.C>A;rs518147.C>G;rs539748.C>T;rs6318.C>G;rs6318.C>T;rs9698290.T>A;rs9698290.T>C

IFNL3/4

Reference;rs12979860 variant (T)

IL6

Reference;rs10242595.G>A;rs10242595.G>C;rs10242595.G>T;rs10499563.T>C;rs1524107.C>G;rs1524107.C>T;rs1800795.C>G;rs1800795.C>T;rs1800796.G>A;rs1800796.G>C;rs1800797.A>C;rs1800797.A>G;rs1800797.A>T;rs2066992.G>A;rs2066992.G>C;rs2066992.G>T;rs2069835.T>C;rs2069837.A>C;rs2069837.A>G;rs2069840.C>G

ITGB3

Reference;rs11871251.G>A;rs11871251.G>C;rs2317676.A>G;rs3785873.G>A;rs3785873.G>T;rs58847127.G>A;rs58847127.G>C;rs58847127.G>T;rs5918.T>C;rs8069732.C>A;rs8069732.C>T

KIF6

Reference;rs20455.A>G;rs9462535.C>A;rs9462535.C>G;rs9462535.C>T;rs9471077.A>G

LPA

Reference;rs10455872.A>G;rs3798220.T>C

MT-RNR1

NC_012920.1:m.1520T>C;NC_012920.1:m.1537C>T;NC_012920.1:m.1556C>T;NC_012920.1:m.669T>C;NC_012920.1:m.747A>G;NC_012920.1:m.786G>A;NC_012920.1:m.807A>C;NC_012920.1:m.807A>G;NC_012920.1:m.839A>G;NC_012920.1:m.896A>G;NC_012920.1:m.930A>G;NC_012920.1:m.960delC;NC_012920.1:m.988G>A;Reference;rs1556422499.delT;rs200887992.G>A;rs267606617.A>G;rs267606618.T>C;rs267606619.C>T;rs28358569.A>G;rs28358571.T>C;rs28358572.T>C;rs3888511.T>G;rs56489998.A>G

MTHFR

Reference;rs1476413.C>G;rs1476413.C>T;rs17367504.A>G;rs17421511.G>A;rs1801131.T>G;rs1801133.G>A;rs1801133.G>C;rs2274976.C>T;rs3737967.G>A;rs4846051.G>A;rs4846051.G>C;rs4846051.G>T

NUDT15

*1;*10;*11;*12;*13;*14;*15;*16;*17;*18;*19;*2;*20;*3;*4;*5;*6;*7;*8;*9

OPRD1

Reference;rs1042114.G>C;rs1042114.G>T;rs10753331.G>A;rs10753331.G>T;rs12749204.A>G;rs204047.G>C;rs204047.G>T;rs204055.T>A;rs204055.T>C;rs204069.A>G;rs204076.T>A;rs204076.T>C;rs204076.T>G;rs2234918.C>G;rs2234918.C>T;rs2236855.C>A;rs2236855.C>G;rs2236857.T>C;rs2236861.G>A;rs2298895.A>T;rs2298896.T>G;rs2298897.C>G;rs3766951.T>C;rs419335.A>G;rs421300.A>C;rs421300.A>G;rs4654327.G>A;rs4654327.G>T;rs482387.G>A;rs482387.G>C;rs508448.A>G;rs529520.A>C;rs529520.A>G;rs533123.G>A;rs533123.G>C;rs569356.A>G;rs581111.A>C;rs581111.A>G;rs581111.A>T;rs6669447.T>C;rs678849.C>G;rs678849.C>T;rs680090.G>A;rs760589.G>A;rs797397.G>A

OPRK1

Reference;rs10111937.C>T;rs1051660.C>A;rs1051660.C>G;rs1051660.C>T;rs16918842.C>A;rs16918842.C>T;rs16918875.G>A;rs16918909.A>G;rs16918941.A>G;rs3802279.C>T;rs3802281.T>C;rs3808627.C>G;rs3808627.C>T;rs6473797.T>C;rs6473799.A>G;rs6985606.T>A;rs6985606.T>C;rs7016778.A>T;rs702764.T>C;rs702764.T>G;rs7813478.T>C;rs963549.C>T;rs997917.T>C

OPRM1

Reference;rs10457090.A>G;rs10457090.A>T;rs10485057.A>G;rs10485058.A>G;rs10485060.C>A;rs1074287.A>G;rs11575856.G>A;rs12190259.A>C;rs12205732.G>A;rs12209447.C>T;rs12210856.T>G;rs1294092.A>G;rs1319339.T>A;rs1319339.T>C;rs13195018.A>C;rs13195018.A>T;rs13203628.A>G;rs1323040.A>G;rs1323042.G>C;rs1323042.G>T;rs1381376.C>A;rs1381376.C>G;rs1381376.C>T;rs1461773.G>A;rs17174629.A>G;rs17174794.C>G;rs17174794.C>T;rs17174801.A>G;rs17180982.dup;rs17181352.A>G;rs1799971.A>G;rs1799972.C>A;rs1799972.C>G;rs1799972.C>T;rs1852629.T>A;rs1852629.T>C;rs1852629.T>G;rs2010884.G>A;rs2075572.G>C;rs2236256.C>A;rs2236257.G>C;rs2236258.C>G;rs2236258.C>T;rs2236259.T>A;rs2236259.T>C;rs2236259.T>G;rs2281617.C>G;rs2281617.C>T;rs3778148.G>T;rs3778150.T>C;rs3778151.T>C;rs3778152.A>G;rs3778156.A>G;rs3798676.C>T;rs3798677.A>G;rs3798678.A>C;rs3798678.A>G;rs3798683.G>A;rs3798688.G>T;rs3823010.G>A;rs483481.G>A;rs483481.G>C;rs4870266.G>A;rs495491.A>G;rs497976.G>A;rs497976.G>T;rs499796.A>G;rs506247.A>C;rs510769.C>T;rs511435.C>G;rs511435.C>T;rs518596.G>A;rs524731.C>A;rs527434.T>A;rs527434.T>C;rs538174.T>C;rs540825.A>C;rs540825.A>G;rs540825.A>T;rs544093.G>A;rs544093.G>T;rs548646.T>A;rs548646.T>C;rs548646.T>G;rs553202.C>T;rs558025.A>G;rs558948.C>G;rs558948.C>T;rs562859.C>A;rs562859.C>G;rs562859.C>T;rs563649.C>T;rs569284.A>C;rs583664.T>C;rs589046.C>T;rs598160.G>A;rs598160.G>C;rs598682.A>C;rs598682.A>G;rs598682.A>T;rs599548.G>A;rs606545.G>A;rs606545.G>C;rs609148.G>A;rs609148.G>T;rs609623.T>A;rs609623.T>C;rs610231.G>A;rs610231.G>C;rs613355.C>A;rs613355.C>G;rs613355.C>T;rs618207.A>C;rs618207.A>G;rs618207.A>T;rs62436463.C>T;rs62638690.G>T;rs632499.A>C;rs632499.A>G;rs632499.A>T;rs639855.C>A;rs639855.C>G;rs642489.G>A;rs642489.G>T;rs644261.G>A;rs644261.G>C;rs644261.G>T;rs645027.A>G;rs647192.G>A;rs647192.G>C;rs648007.A>C;rs648007.A>G;rs648893.A>G;rs650825.G>A;rs6557337.C>A;rs6557337.C>T;rs658156.A>C;rs658156.A>G;rs658156.A>T;rs671531.A>G;rs671531.A>T;rs675026.A>C;rs675026.A>G;rs677830.C>A;rs677830.C>G;rs677830.C>T;rs681243.T>A;rs681243.T>C;rs6902403.T>C;rs6912029.G>T;rs73576470.A>G;rs7748401.T>G;rs7763748.C>A;rs7763748.C>T;rs7776341.A>C;rs79910351.C>T;rs9282815.C>A;rs9282815.C>T;rs9322446.G>A;rs9322447.A>C;rs9322447.A>G;rs9322447.A>T;rs9322453.G>C;rs9371773.G>A;rs9371776.G>A;rs9384174.C>G;rs9384174.C>T;rs9384179.G>A;rs9384179.G>T;rs9397685.A>G;rs9397685.A>T;rs9397687.C>T;rs9479757.G>A;rs9479779.A>G

RYR1

NC_000019.10:g.38440818G>C;NC_000019.10:g.38444179C>A;NC_000019.10:g.38444252G>T;NC_000019.10:g.38444257A>C;NC_000019.10:g.38444257A>G;NC_000019.10:g.38448680_38448681insGGA;NC_000019.10:g.38448715G>A;NC_000019.10:g.38451785C>A;NC_000019.10:g.38452985C>T;NC_000019.10:g.38455253C>G;NC_000019.10:g.38455254T>C;NC_000019.10:g.38455347T>C;NC_000019.10:g.38455504G>T;NC_000019.10:g.38466392G>A;NC_000019.10:g.38469404A>C;NC_000019.10:g.38485679T>C;NC_000019.10:g.38486095A>G;NC_000019.10:g.38490642A>C;NC_000019.10:g.38494454G>A;NC_000019.10:g.38496455G>A;NC_000019.10:g.38499234T>C;NC_000019.10:g.38499642C>A;NC_000019.10:g.38499667G>A;NC_000019.10:g.38499667G>T;NC_000019.10:g.38499680T>A;NC_000019.10:g.38499683G>A;NC_000019.10:g.38499696C>G;NC_000019.10:g.38499719A>G;NC_000019.10:g.38499730G>A;NC_000019.10:g.38499985A>T;NC_000019.10:g.38500000G>A;NC_000019.10:g.38502669C>G;NC_000019.10:g.38504298G>A;NC_000019.10:g.38506508C>G;NC_000019.10:g.38506865C>T;NC_000019.10:g.38507821C>T;NC_000019.10:g.38512279G>A;NC_000019.10:g.38515052C>T;NC_000019.10:g.38516181T>C;NC_000019.10:g.38516208G>C;NC_000019.10:g.38517470T>C;NC_000019.10:g.38517523T>A;NC_000019.10:g.38519424C>A;NC_000019.10:g.38519432A>T;NC_000019.10:g.38519447A>G;NC_000019.10:g.38525432C>T;NC_000019.10:g.38527710G>C;NC_000019.10:g.38528372G>T;NC_000019.10:g.38529002G>C;NC_000019.10:g.38529042C>T;NC_000019.10:g.38543380A>T;NC_000019.10:g.38543566G>A;NC_000019.10:g.38543810C>T;NC_000019.10:g.38548253A>T;NC_000019.10:g.38561140G>C;NC_000019.10:g.38561213C>T;NC_000019.10:g.38561362G>A;NC_000019.10:g.38561363G>T;NC_000019.10:g.38565023T>G;NC_000019.10:g.38570649C>G;NC_000019.10:g.38577931A>C;NC_000019.10:g.38578205G>T;NC_000019.10:g.38580039_38580040delinsAA;NC_000019.10:g.38580041C>A;NC_000019.10:g.38580126C>G;NC_000019.10:g.38580397G>C;NC_000019.10:g.38580416C>T;NC_000019.10:g.38585078A>G;NC_000019.10:g.38585099G>A;NC_000019.10:g.38586190A>G;NC_000019.10:g.38587362G>C;NC_000019.10:g.38587363G>C;Reference;rs111272095.C>T;rs111364296.G>A;rs111565359.G>A;rs111657878.T>C;rs111888148.G>A;rs112151058.G>A;rs112196644.A>G;rs112563513.G>A;rs112596687.T>A;rs112772310.G>A;rs113210953.A>G;rs113332073.G>A;rs113332073.G>T;rs117886618.C>G;rs118192113.C>A;rs118192116.C>G;rs118192116.C>T;rs118192121.A>C;rs118192122.G>A;rs118192123.T>C;rs118192124.C>T;rs118192126.A>G;rs118192130.G>A;rs118192135.G>A;rs118192140.C>T;rs118192151.G>A;rs118192151.G>C;rs118192158.G>A;rs118192159.C>G;rs118192160.G>A;rs118192160.G>T;rs118192161.C>T;rs118192162.A>C;rs118192162.A>G;rs118192163.G>A;rs118192163.G>C;rs118192163.G>T;rs118192167.A>G;rs118192168.G>A;rs118192170.T>C;rs118192172.C>T;rs118192175.C>T;rs118192176.G>A;rs118192177.C>G;rs118192177.C>T;rs118192178.C>G;rs118192178.C>T;rs118192181.C>T;rs118204421.C>T;rs118204422.T>C;rs118204423.G>A;rs118204423.G>C;rs121918592.G>A;rs121918592.G>C;rs121918593.G>A;rs121918594.G>A;rs121918594.G>T;rs121918595.C>T;rs121918596._38499648delGAG;rs137932199.G>A;rs137933390.A>G;rs138874610.G>A;rs139161723.G>A;rs139647387.A>G;rs140152019.G>A;rs140616359.G>A;rs141646642.C>G;rs141942845.G>A;rs142474192.G>A;rs142474192.G>T;rs143398211.G>A;rs143520367.C>T;rs143987857.G>A;rs143988412.A>G;rs143988412.A>T;rs144336148.G>A;rs144685735.C>T;rs145573319.A>G;rs145801146.C>T;rs146306934.G>A;rs146429605.A>G;rs146504767.G>A;rs146876145.C>T;rs147136339.A>G;rs147213895.A>G;rs147303895.G>A;rs147707463.C>T;rs147723844.A>G;rs148399313.G>A;rs148623597.G>A;rs150396398.G>C;rs151029675.C>T;rs151119428.G>A;rs1801086.G>A;rs1801086.G>C;rs1801086.G>T;rs180714609.G>A;rs186983396.C>G;rs186983396.C>T;rs192863857.C>T;rs193922744.T>G;rs193922745._38440752delTGA;rs193922746.A>G;rs193922747.T>C;rs193922748.C>T;rs193922749.C>A;rs193922750.C>A;rs193922751.G>A;rs193922752.A>G;rs193922753.G>A;rs193922753.G>T;rs193922754.G>A;rs193922755.G>A;rs193922756.A>G;rs193922757.C>T;rs193922759.G>A;rs193922760.A>T;rs193922761.G>T;rs193922762.C>A;rs193922762.C>T;rs193922764.C>A;rs193922764.C>G;rs193922764.C>T;rs193922766.G>A;rs193922766.G>T;rs193922767.G>A;rs193922767.G>T;rs193922768.C>A;rs193922768.C>T;rs193922769.T>C;rs193922769.T>G;rs193922770.C>T;rs193922772.G>A;rs193922772.G>T;rs193922775.C>T;rs193922776.C>T;rs193922777.C>T;rs193922781.C>T;rs193922782.T>G;rs193922783.T>A;rs193922788.G>C;rs193922789.G>A;rs193922790.A>T;rs193922791.C>T;rs193922792.G>T;rs193922793.T>A;rs193922795.G>A;rs193922797.G>A;rs193922798.G>C;rs193922799.G>A;rs193922801.A>G;rs193922802.G>A;rs193922803.C>T;rs193922804.A>G;rs193922805.T>G;rs193922806.C>G;rs193922807.G>C;rs193922809.G>A;rs193922810.G>A;rs193922810.G>T;rs193922812.C>T;rs193922813.G>C;rs193922815.G>A;rs193922815.G>C;rs193922816.C>T;rs193922817.C>T;rs193922818.G>A;rs193922819.T>C;rs193922822.C>G;rs193922822.C>T;rs193922824.C>T;rs193922826.C>G;rs193922826.C>T;rs193922827.G>C;rs193922828.G>A;rs193922829.G>A;rs193922830.C>T;rs193922831.T>A;rs193922832.G>A;rs193922833.G>A;rs193922834.G>A;rs193922838.G>A;rs193922838.G>T;rs193922839.G>A;rs193922840.T>G;rs193922842.C>G;rs193922842.C>T;rs193922843.G>T;rs193922844.C>A;rs193922848.A>T;rs193922849.C>A;rs193922850.T>C;rs193922852.G>C;rs193922852.G>T;rs193922853.A>T;rs193922855.C>T;rs193922860.G>A;rs193922862._38572267delinsCT;rs193922863.C>T;rs193922864.T>C;rs193922865.T>G;rs193922866.G>A;rs193922867.C>T;rs193922868.G>A;rs193922873.G>A;rs193922873.G>T;rs193922874.T>C;rs193922876.C>T;rs193922877.delA;rs193922878.C>G;rs193922879.G>A;rs193922880.C>G;rs193922883.T>C;rs193922888.G>A;rs193922895.C>A;rs193922896.G>T;rs193922898.T>A;rs199738299.A>G;rs199870223.C>T;rs200766617.G>A;rs201321695.A>G;rs2145447772.G>A;rs2145447772.G>C;rs28933396.G>A;rs28933396.G>T;rs28933397.C>T;rs34390345.A>G;rs34694816.A>G;rs34934920.C>T;rs35180584.C>G;rs35364374.G>T;rs370634440.G>A;rs370634440.G>T;rs372958050.T>C;rs373406011.C>T;rs375626634.T>C;rs375915752.C>T;rs376149732.C>T;rs4802584.C>G;rs537994744.G>A;rs549201486.C>T;rs551223467.C>T;rs553055844.G>A;rs55876273.G>C;rs587784372.C>T;rs63749869.G>A;rs727504129.C>T;rs746818096.T>A;rs747177274.G>C;rs748575133.T>A;rs749040743.G>A;rs751180702.G>A;rs752652072.C>T;rs754476250.C>T;rs754785770.A>G;rs755088027.G>A;rs756850145.A>G;rs757753317.G>A;rs759500310.T>C;rs761616815.G>A;rs762401851.G>A;rs763112609.C>T;rs763352221.C>T;rs767553612.A>G;rs768360593.G>A;rs768535909.T>C;rs769482889.C>T;rs770593660.G>C;rs771058055.G>A;rs771741606.C>T;rs773040531.A>G;rs778241277.G>A;rs781104539.A>G;rs781126470.C>T;rs901087791.G>A;rs914804033.G>A;rs914804033.G>C;rs917523269.C>T;rs936513262.G>A;rs959170123.G>A;rs976108591.A>G;rs995399438.T>C

SLCO1B1

*1;*10;*11;*12;*13;*14;*15;*16;*19;*2;*20;*23;*24;*25;*26;*27;*28;*29;*3;*30;*31;*32;*33;*34;*36;*37;*38;*39;*4;*40;*41;*42;*43;*44;*45;*46;*47;*5;*6;*7;*8;*9

TNF

Reference;rs1799724.C>T;rs1799964.T>C;rs1800610.G>A;rs1800629.G>A;rs1800630.C>A;rs1800750.G>A;rs2736195.A>G;rs3093548.C>T;rs3093662.A>G;rs3093726.T>C;rs361525.G>A;rs4248158.C>T;rs4248159.C>A;rs4248160.G>A;rs4248163.C>A;rs4248163.C>G;rs4248163.C>T;rs4647198.C>T;rs4987086.G>A;rs55634887.G>A;rs55994001.C>A;rs55994001.C>T

TPMT

*1;*10;*11;*12;*13;*14;*15;*16;*17;*18;*19;*2;*20;*21;*22;*23;*24;*25;*26;*27;*28;*29;*30;*31;*32;*33;*34;*35;*36;*37;*38;*39;*3A;*3B;*3C;*4;*40;*41;*42;*43;*44;*5;*6;*7;*8;*9

UGT1A1

*1;*27;*28;*36;*37;*6;*80;*80+*28;*80+*37

UGT1A4

*1a;*1b;*1c;*2;*3a;*3b;*4;*7

UGT2B15

*1;*2;*3;*4;*5;*6;*7

VKORC1

Reference;rs9923231 variant (T)

YEATS4

Reference;rs7297610.C>T

*1 and *2 are not distinguishable due to the lack of probes for rs30193105. Samples with *2 will be called as *1.
  • *3 and *4 are not distinguishable due to the lack of probes for rs30193105, while *3 core variant rs2108622 is covered by all three products. Samples with *4 will be called as *3.

  • UGT1A1: *28 (rs8175347 [TA]8) and *37 (rs8175347 [TA]9) are not covered in all three PGx products due to the lack of functional probes.

  • UGT2B15: GSAv4-ePGx and GCRA-ePGx do not support *4 or *5 due to the lack of probes for rs4148269 and rs1902023.

  • GSA-PGx-48v4-0_20079540_E

    CYP2C9

    10:96701973,ilmnseq_rs774607211_ilmnfwd_ilmndup1,ilmnseq_rs774607211_ilmnfwd_ilmndup2

    GSA-PGx-48v4-0_20079540_E

    CYP2D6

    ilmnseq_rs1135836_ilmnrev_deg3a3b0

    GSA-PGx-48v4-0_20079540_E

    CYP2D6

    PGX_IlmnSeq_rs769157652_BEST,ilmnseq_rs769157652_ilmnrev_F2BT,ilmnseq_rs769157652_ilmnrev_deg3a1b0

    GSA-PGx-48v4-0_20079540_E

    CYP4F2

    ilmnseq_rs4020346_ilmnfwd

    GSA-PGx-48v4-0_20079540_E

    OPRM1

    ilmnseq_rs9384179.1_F2BT

    GSA-PGx-48v4-0_20079540_E

    UGT1A1

    ilmnseq_rs8175347.2_ilmnrev_F2BTindel_cei_ilmndup31

    GCRA-PGx-24v1-0_20084467_C

    CYP2C19

    IlmnSeq_rs113934938,ilmnseq_rs113934938_ilmnfwd,ilmnseq_rs113934938_ilmnfwd_ilmndup1,ilmnseq_rs113934938_ilmnfwd_ilmndup2,rs113934938

    GCRA-PGx-24v1-0_20084467_C

    CYP2C9

    ilmnseq_rs774607211_ilmnrev,ilmnseq_rs774607211_ilmnrev_ilmndup2

    GCRA-PGx-24v1-0_20084467_C

    CYP2D6

    ilmnseq_rs2004511_dup1

    GCRA-PGx-24v1-0_20084467_C

    CYP2D6

    PGX_IlmnSeq_rs769157652_BEST,ilmnseq_rs769157652_ilmnrev,ilmnseq_rs769157652_ilmnrev_deg3a1b0,ilmnseq_rs769157652_ilmnrev_deg3a1b0_ilmndup1,ilmnseq_rs769157652_ilmnrev_ilmndup1,seq-rs61737947

    GCRA-PGx-24v1-0_20084467_C

    CYP4F2

    ilmnseq_rs4020346_ilmnfwd

    GCRA-PGx-24v1-0_20084467_C

    OPRM1

    ilmnseq_rs9384179.1_F2BT

    ABCG2

    Reference;rs2231142.G>T

    ADH1B

    Reference;rs1229984.T>C;rs1229984.T>G;rs1229985.A>G;rs17033.T>C;rs1789891.C>A;rs2018417.C>A;rs2018417.C>T;rs2066702.G>A;rs75967634.C>T

    ALDH2

    Reference;rs671.G>A

    ANK3

    Reference;rs143414470.T>C

    ANKK1

    Reference;rs1800497.G>A;rs2587550.G>A;rs2734849.A>C;rs2734849.A>G;rs4938013.A>C;rs4938013.A>G;rs4938013.A>T;rs7118900.G>A;rs7118900.G>C

    APOE

    E2;E3;E4

    ATM

    Reference;rs11212570.G>A;rs11212570.G>T;rs11212617.C>A;rs1801516.G>A;rs620815.T>A;rs620815.T>C

    BDNF

    Reference;rs10835210.C>A;rs10835210.C>G;rs11030101.A>G;rs11030101.A>T;rs11030104.A>G;rs11030118.G>A;rs11030119.G>A;rs11030119.G>T;rs1491850.T>C;rs16917234.T>A;rs16917234.T>C;rs1967554.A>C;rs2030324.A>G;rs61888800.G>T;rs6265.C>T;rs7103411.C>T;rs7124442.C>G;rs7124442.C>T;rs7127507.T>C;rs7934165.G>A;rs962369.T>C;rs988748.C>G

    GDA-ePGx

    GDAePGx_G2_GS_import.txt

    GDA-ePGx G2 product filesarrow-up-right

    GSAv4-ePGx

    GSAePGx_E2_GS_import.txt

    GSAv4-ePGx product filesarrow-up-right

    GCRA-ePGx

    GCRAePGx_E2_GS_import.txt

    GCRA-ePGx product filesarrow-up-right

    GDA_PGx-8v1-0_20042614_G

    CYP1A2

    ilmnseq_rs35694136_ilmnfwd;ilmnseq_rs35694136_ilmnfwd_ilmndup1;ilmnseq_rs35694136_ilmnfwd_ilmndup2;ilmnseq_rs35694136_ilmnfwd_ilmndup3;ilmnseq_rs35694136_ilmnfwd_ilmndup4;ilmnseq_rs35694136_ilmnfwd_ilmndup5;ilmnseq_rs35694136_ilmnfwd_ilmndup6;ilmnseq_rs35694136_ilmnfwd_ilmndup7

    GDA_PGx-8v1-0_20042614_G

    CYP2D6

    ilmnseq_rs72549352_ilmnrev_F2BTindel_deg3a3b3_IlmnRep;ilmnseq_rs72549352_ilmnrev_F2BTindel_deg3a3b3_ilmndup1;ilmnseq_rs72549352_ilmnrev_F2BTindel_deg3a3b3_ilmndup3;ilmnseq_rs72549352_ilmnrev_F2BTindel_ilmndup1;ilmnseq_rs72549352_ilmnrev_F2BTindel_ilmndup3

    GDA_PGx-8v1-0_20042614_G

    CYP4F2

    ilmnseq_rs4020346_ilmnfwd

    GDA_PGx-8v1-0_20042614_G

    UGT1A1

    GSA-PGx-48v4-0_20079540_E

    CYP1A2

    IlmnSeq_rs35694136_IlmnFWD;ilmnseq_rs35694136_ilmnfwd_ilmndup2;ilmnseq_rs35694136_ilmnfwd_ilmndup3;ilmnseq_rs35694136_ilmnfwd_ilmndup4;ilmnseq_rs35694136_ilmnfwd_ilmndup5;ilmnseq_rs35694136_ilmnfwd_ilmndup6;ilmnseq_rs35694136_ilmnfwd_ilmndup7

    GSA-PGx-48v4-0_20079540_E

    CYP2C19

    IlmnSeq_rs367543002,ilmnseq_rs367543002_ilmnfwd,ilmnseq_rs367543002_ilmnfwd_ilmndup1,ilmnseq_rs367543002_ilmnrev_deg3a1b0_ilmndup1,rs367543002

    GSA-PGx-48v4-0_20079540_E

    CYP2C19

    ilmnseq_rs17882687_ilmnfwd_ilmndup2,ilmnseq_rs17882687_ilmnrev,ilmnseq_rs17882687_ilmnrev_ilmndup1,ilmnseq_rs17882687_ilmnrev_ilmndup2

    GSA-PGx-48v4-0_20079540_E

    CYP2C19

    GCRA-PGx-24v1-0_20084467_C

    COMT

    ilmnseq_rs7287550_ilmnfwd_F2BT

    GCRA-PGx-24v1-0_20084467_C

    CYP1A2

    IlmnSeq_rs35694136;IlmnSeq_rs35694136_IlmnFWD;ilmnseq_rs35694136_ilmnfwd_ilmndup2;ilmnseq_rs35694136_ilmnfwd_ilmndup5;ilmnseq_rs35694136_ilmnfwd_ilmndup6;rs35694136

    GCRA-PGx-24v1-0_20084467_C

    CYP2C19

    ilmnseq_rs367543002_ilmnfwd

    GCRA-PGx-24v1-0_20084467_C

    CYP2C19

    How to use the auxiliary filearrow-up-right

    ilmnseq_rs8175347_ilmnfwd_F2BTindel;ilmnseq_rs8175347_ilmnfwd_F2BTindel_ilmndup1;ilmnseq_rs8175347_ilmnrev;ilmnseq_rs8175347_ilmnrev_ilmndup1;ilmnseq_rs8175347_ilmnrev_ilmndup2;ilmnseq_rs8175347_ilmnrev_ilmndup3

    IlmnSeq_rs113934938,ilmnseq_rs113934938_ilmnfwd,ilmnseq_rs113934938_ilmnfwd_ilmndup1,ilmnseq_rs113934938_ilmnfwd_ilmndup2,rs113934938

    ilmnseq_rs17882687_ilmnfwd_ilmndup2,ilmnseq_rs17882687_ilmnrev_ilmndup1